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| | Publication Year | Title | Author(s) |
| 1 | 2024 | The role of aberrant DNA methylation in cancer initiation and clinical impacts. | Geissler, Franziska; Nesic, Ksenija; Kondrashova, Olga; Dobrovic, Alexander ; Swisher, Elizabeth M; Scott, Clare L; J Wakefield, Matthew |
| 2 | 30-Oct-2023 | Graft-derived cfDNA Monitoring in Plasma and Bile During Normothermic Machine Perfusion in Liver Transplantation Is Feasible and a Potential Tool for Assessing Graft Viability. | Cox, Daniel R A ; Lee, Eunice ; Wong, Boris K L; McClure, Tess ; Zhang, Fan; Goh, Su Kah ; Vago, Angela ; Jackett, Louise A ; Fink, Michael A ; Jones, Robert M ; Perini, Marcos V ; Dobrovic, Alexander ; Testro, Adam G ; Starkey, Graham M ; Muralidharan, Vijayaragavan |
| 3 | 9-Jun-2023 | Graft-Derived Cell-Free DNA Quantification following Liver Transplantation Using Tissue-Specific DNA Methylation and Donor-Specific Genotyping Techniques: An Orthogonal Comparison Study. | Cox, Daniel R A ; McClure, Tess ; Zhang, Fan; Wong, Boris Ka Leong; Testro, Adam G ; Goh, Su Kah ; Muralidharan, Vijayaragavan ; Dobrovic, Alexander |
| 4 | 3-Jun-2023 | Identifying primary and secondary MLH1 epimutation carriers displaying low-level constitutional MLH1 methylation using droplet digital PCR and genome-wide DNA methylation profiling of colorectal cancers. | Joo, Jihoon E; Mahmood, Khalid; Walker, Romy; Georgeson, Peter; Candiloro, Ida; Clendenning, Mark; Como, Julia; Joseland, Sharelle; Preston, Susan; Graversen, Lise; Wilding, Mathilda; Field, Michael; Lemon, Michelle; Wakeling, Janette; Marfan, Helen; Susman, Rachel; Isbister, Joanne; Edwards, Emma; Bowman, Michelle; Kirk, Judy; Ip, Emilia; McKay, Lynne; Antill, Yoland; Hopper, John L; Boussioutas, Alex; Macrae, Finlay A; Dobrovic, Alexander ; Jenkins, Mark A; Rosty, Christophe; Winship, Ingrid M; Buchanan, Daniel D |
| 5 | 4-May-2023 | Targeting homologous recombination deficiency in uterine leiomyosarcoma | Dall, Genevieve; Vandenberg, Cassandra J; Nesic, Ksenija; Ratnayake, Gayanie; Zhu, Wenying; Vissers, Joseph H A; Bedő, Justin; Penington, Jocelyn; Wakefield, Matthew J; Kee, Damien ; Carmagnac, Amandine; Lim, Ratana; Shield-Artin, Kristy; Milesi, Briony; Lobley, Amanda; Kyran, Elizabeth L; O'Grady, Emily; Tram, Joshua; Zhou, Warren; Nugawela, Devindee; Stewart, Kym Pham; Caldwell, Reece; Papadopoulos, Lia; Ng, Ashley P; Dobrovic, Alexander ; Fox, Stephen B; McNally, Orla; Power, Jeremy D; Meniawy, Tarek; Tan, Teng Han; Collins, Ian M; Klein, Oliver ; Barnett, Stephen A ; Olesen, Inger; Hamilton, Anne; Hofmann, Oliver; Grimmond, Sean; Papenfuss, Anthony T; Scott, Clare L; Barker, Holly E |
| 6 | 2023 | Removing unwanted variation from large-scale RNA sequencing data with PRPS. | Molania, Ramyar; Foroutan, Momeneh; Gagnon-Bartsch, Johann A; Gandolfo, Luke C; Jain, Aryan; Sinha, Abhishek; Olshansky, Gavriel; Dobrovic, Alexander ; Papenfuss, Anthony T; Speed, Terence P |
| 7 | 2023 | The microtubule inhibitor eribulin demonstrates efficacy in platinum-resistant and refractory high-grade serous ovarian cancer patient-derived xenograft models. | Ho, Gwo Yaw; Vandenberg, Cassandra J; Lim, Ratana; Christie, Elizabeth L; Garsed, Dale W; Lieschke, Elizabeth; Nesic, Ksenija; Kondrashova, Olga; Ratnayake, Gayanie; Radke, Marc; Penington, Jocelyn S; Carmagnac, Amandine; Heong, Valerie; Kyran, Elizabeth L; Zhang, Fan; Traficante, Nadia; Huang, Ruby; Dobrovic, Alexander ; Swisher, Elizabeth M; McNally, Orla; Kee, Damien ; Wakefield, Matthew J; Papenfuss, Anthony T; Bowtell, David D L; Barker, Holly E; Scott, Clare L |
| 8 | 28-Jun-2022 | Evaluating DNA recovery efficiency following bisulphite modification from plasma samples submitted for cell-free DNA methylation analysis. | Cox, Daniel R A ; Wong, Boris Ka Leong; Lee, Eunice ; Testro, Adam G ; Muralidharan, Vijayaragavan ; Dobrovic, Alexander ; Goh, Su Kah |
| 9 | Jun-2022 | Low Levels of Hepatocyte-Specific Methylation in Cell-Free DNA Are a Strong Negative Predictor for Acute T Cell-Mediated Rejection Requiring Treatment Following Liver Transplantation. | Cox, Daniel R A ; Low, Nicholas ; Goh, Su Kah ; Lee, Eunice ; Vago, Angela ; Jackett, Louise A ; Lokan, Julie ; Braat, Sabine; Jones, Robert M ; Testro, Adam G ; Dobrovic, Alexander ; Muralidharan, Vijayaragavan |
| 10 | 15-Sep-2021 | Acquired RAD51C Promoter Methylation Loss Causes PARP Inhibitor Resistance in High-Grade Serous Ovarian Carcinoma. | Nesic, Ksenija; Kondrashova, Olga; Hurley, Rachel M; McGehee, Cordelia D; Vandenberg, Cassandra J; Ho, Gwo-Yaw; Lieschke, Elizabeth; Dall, Genevieve; Bound, Nirashaa; Shield-Artin, Kristy; Radke, Marc; Musafer, Ashan; Chai, Zi Qing; Ghamsari, Mohammad Reza Eftekhariyan; Harrell, Maria I; Kee, Damien ; Olesen, Inger; McNally, Orla; Traficante, Nadia; Australian Ovarian Cancer Study, null; DeFazio, Anna; Bowtell, David D L; Swisher, Elizabeth M; Weroha, S John; Nones, Katia; Waddell, Nicola; Kaufmann, Scott H; Dobrovic, Alexander ; Wakefield, Matthew J; Scott, Clare L |
| 11 | Sep-2021 | Characterization of a RAD51C-silenced high-grade serous ovarian cancer model during development of PARP inhibitor resistance. | Hurley, Rachel M; McGehee, Cordelia D; Nesic, Ksenija; Correia, Cristina; Weiskittel, Taylor M; Kelly, Rebecca L; Venkatachalam, Annapoorna; Hou, Xiaonan; Pathoulas, Nicholas M; Meng, X Wei; Kondrashova, Olga; Radke, Marc R; Schneider, Paula A; Flatten, Karen S; Peterson, Kevin L; Becker, Marc A; Wong, Ee Ming; Southey, Melissa S; Dobrovic, Alexander ; Lin, Kevin K; Harding, Thomas C; McNeish, Iain; Ross, Christian A; Wagner, Jill M; Wakefield, Matthew J; Scott, Clare L; Haluska, Paul; Wahner Hendrickson, Andrea E; Karnitz, Larry M; Swisher, Elizabeth M; Li, Hu; Weroha, S John; Kaufmann, Scott H |
| 12 | 23-Aug-2021 | Elevated levels of circulating mitochondrial DNA predict early allograft dysfunction in patients following liver transplantation. | Yoshino, Osamu ; Wong, Boris Ka Leong; Cox, Daniel R A ; Lee, Eunice ; Hepworth, Graham; Christophi, Christopher ; Jones, Robert M ; Dobrovic, Alexander ; Muralidharan, Vijayaragavan ; Perini, Marcos V |
| 13 | 28-Jul-2021 | Acquired RAD51C promoter methylation loss causes PARP inhibitor resistance in high grade serous ovarian carcinoma. | Nesic, Ksenija; Kondrashova, Olga; Hurley, Rachel M; McGehee, Cordelia D; Vandenberg, Cassandra J; Ho, Gwo-Yaw; Lieschke, Elizabeth; Dall, Genevieve; Bound, Nirashaa; Shield-Artin, Kristy; Radke, Marc; Musafer, Ashan; Chai, Zi Qing; Eftekhariyan Ghamsari, Mohammad Reza; Harrell, Maria I; Kee, Damien ; Olesen, Inger; McNally, Orla; Traficante, Nadia; Cancer Study, Australian Ovarian; DeFazio, Anna; Bowtell, David D L; Swisher, Elizabeth M; Weroha, S John; Nones, Katia; Waddell, Nicola; Kaufmann, Scott H; Dobrovic, Alexander ; Wakefield, Matthew J; Scott, Clare L |
| 14 | 21-Jun-2021 | A Synthetic DNA Construct to Evaluate the Recovery Efficiency of Cell-Free DNA Extraction and Bisulfite Modification. | Goh, Su Kah ; Cox, Daniel R A ; Wong, Boris Ka Leong; Musafer, Ashan; Witkowski, Tom ; Do, Hongdo; Muralidharan, Vijayaragavan ; Dobrovic, Alexander |
| 15 | 9-Jun-2021 | PDCD1 Polymorphisms May Predict Response to Anti-PD-1 Blockade in Patients With Metastatic Melanoma. | Parakh, Sagun ; Musafer, Ashan; Paessler, Sabrina; Witkowski, Tom ; Suen, Connie S N Li Wai; Tutuka, Candani S A; Carlino, Matteo S; Menzies, Alexander M; Scolyer, Richard A; Cebon, Jonathan S ; Dobrovic, Alexander ; Long, Georgina V; Klein, Oliver ; Behren, Andreas |
| 16 | 3-May-2021 | Molecular and clinical determinants of response and resistance to rucaparib for recurrent ovarian cancer treatment in ARIEL2 (Parts 1 and 2). | Swisher, Elizabeth M; Kwan, Tanya T; Oza, Amit M; Tinker, Anna V; Ray-Coquard, Isabelle; Oaknin, Ana; Coleman, Robert L; Aghajanian, Carol; Konecny, Gottfried E; O'Malley, David M; Leary, Alexandra; Provencher, Diane; Welch, Stephen; Chen, Lee-May; Wahner Hendrickson, Andrea E; Ma, Ling; Ghatage, Prafull; Kristeleit, Rebecca S; Dorigo, Oliver; Musafer, Ashan; Kaufmann, Scott H; Elvin, Julia A; Lin, Douglas I; Chambers, Setsuko K; Dominy, Erin; Vo, Lan-Thanh; Goble, Sandra; Maloney, Lara; Giordano, Heidi; Harding, Thomas; Dobrovic, Alexander ; Scott, Clare L; Lin, Kevin K; McNeish, Iain A |
| 17 | 9-Apr-2021 | Ropporin-1 and 1B Are Widely Expressed in Human Melanoma and Evoke Strong Humoral Immune Responses. | Da Gama Duarte, Jessica; Woods, Katherine; Quigley, Luke T; Deceneux, Cyril; Tutuka, Candani; Witkowski, Tom ; Ostrouska, Simone; Hudson, Chris; Tsao, Simon Chang-Hao; Pasam, Anupama; Dobrovic, Alexander ; Blackburn, Jonathan M; Cebon, Jonathan S ; Behren, Andreas |
| 18 | 24-Mar-2021 | Comment on: "Hypoxia differently modulates the release of mitochondrial and nuclear DNA". | Wong, Boris K L; Zhang, Fan; Do, Hongdo; Testro, Adam G ; Muralidharan, Vijayaragavan ; Dobrovic, Alexander ; Cox, Daniel R A |
| 19 | 21-Jan-2021 | Cerebrospinal fluid liquid biopsy for detecting somatic mosaicism in brain. | Ye, Zimeng; Chatterton, Zac; Pflueger, Jahnvi; Damiano, John A; McQuillan, Lara ; Harvey, Anthony Simon; Malone, Stephen; Do, Hongdo; Maixner, Wirginia; Schneider, Amy L ; Nolan, Bernadette; Wood, Martin; Lee, Wei Shern; Gillies, Greta; Pope, Kate; Wilson, Michael; Lockhart, Paul J; Dobrovic, Alexander ; Scheffer, Ingrid E ; Bahlo, Melanie; Leventer, Richard J; Lister, Ryan; Berkovic, Samuel F ; Hildebrand, Michael S |
| 20 | 28-Nov-2020 | Donor-specific cell-free DNA as a biomarker in liver transplantation: A review. | McClure, Tess ; Goh, Su Kah ; Cox, Daniel R A ; Muralidharan, Vijayaragavan ; Dobrovic, Alexander ; Testro, Adam G |
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