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Title: | Radiomics feature stability of open-source software evaluated on apparent diffusion coefficient maps in head and neck cancer. | Austin Authors: | Korte, James C;Cardenas, Carlos;Hardcastle, Nicholas;Kron, Tomas;Wang, Jihong;Bahig, Houda;Elgohari, Baher;Ger, Rachel;Court, Laurence;Fuller, Clifton D;Ng, Sweet Ping | Affiliation: | Clinical Oncology & Nuclear Medicine Department, Mansoura University, Mansoura, Egypt Department of Physical Science, Peter MacCallum Cancer Centre, 305 Grattan St, Melbourne, VIC, 3000, Australia Department of Biomedical Engineering, University of Melbourne, Melbourne, Australia Centre for Medical Radiation Physics, University of Wollongong, Wollongong, Australia Sir Peter MacCallum Department of Oncology, University of Melbourne, Melbourne, Australia Department of Radiation Oncology, University of Texas MD Anderson Cancer Center, Houston, USA Department of Radiation Oncology, Peter MacCallum Cancer Centre, Melbourne, Australia Radiation Oncology Department of Radiation Physics, University of Texas MD Anderson Cancer Center, Houston, USA Radiation Oncology Department, Centre Hospitalier de l'Université de Montréal, Montreal, Canada Department of Radiation Oncology, Mayo Clinic, Phoenix, AZ, USA Department of Radiation Physics, University of Texas MD Anderson Cancer Center, Houston, USA Department of Radiation Oncology, University of Texas MD Anderson Cancer Center, Houston, USA Olivia Newton-John Cancer Wellness and Research Centre |
Issue Date: | 3-Sep-2021 | Publication information: | Scientific Reports 2021; 11(1): 17633 | Abstract: | Radiomics is a promising technique for discovering image based biomarkers of therapy response in cancer. Reproducibility of radiomics features is a known issue that is addressed by the image biomarker standardisation initiative (IBSI), but it remains challenging to interpret previously published radiomics signatures. This study investigates the reproducibility of radiomics features calculated with two widely used radiomics software packages (IBEX, MaZda) in comparison to an IBSI compliant software package (PyRadiomics). Intensity histogram, shape and textural features were extracted from 334 diffusion weighted magnetic resonance images of 59 head and neck cancer (HNC) patients from the PREDICT-HN observational radiotherapy study. Based on name and linear correlation, PyRadiomics shares 83 features with IBEX and 49 features with MaZda, a sub-set of well correlated features are considered reproducible (IBEX: 15 features, MaZda: 18 features). We explore the impact of including non-reproducible radiomics features in a HNC radiotherapy response model. It is possible to classify equivalent patient groups using radiomic features from either software, but only when restricting the model to reliable features using a correlation threshold method. This is relevant for clinical biomarker validation trials as it provides a framework to assess the reproducibility of reported radiomic signatures from existing trials. | URI: | https://ahro.austin.org.au/austinjspui/handle/1/27425 | DOI: | 10.1038/s41598-021-96600-4 | Journal: | Scientific Reports | PubMed URL: | 34480036 | Type: | Journal Article |
Appears in Collections: | Journal articles |
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