Austin Health

Title
Real-world challenges in undertaking NTRK fusion testing in non-small cell lung cancer.
Publication Date
2023-07-31
Author(s)
Poh, Ashleigh
Sammour, Abdelaziz
Mathai, Jared
Peverall, Joanne
Van Vliet, Chris
Asadi, Khashayar
Parakh, Sagun
Subject
Neurotrophic tropomyosin-receptor kinase (NTRK)
fluorescence in situ hybridization (FISH)
immunohistochemistry (IHC)
incidence
non-small cell lung cancer (NSCLC)
Type of document
Journal Article
OrcId
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DOI
10.21037/jtd-23-113
Abstract
We performed a retrospective analysis to determine the incidence of neurotrophic tropomyosin-receptor kinase (NTRK) fusion in non-small cell lung cancer (NSCLC). Archival NSCLC tissues between 2018-2020 were screened by immunohistochemistry (IHC) with IHC-positive cases undergoing confirmatory molecular analysis. Correlative clinicopathologic parameters were collected. Of 289 samples analyzed, 10 (3.5%) cases had NTRK expression on IHC. The median age of patients with NTRK-positivity on IHC was 74.9 (range, 44-88) years and 70% had a smoking history. The cohort included seven adenocarcinomas and one each squamous cell carcinoma, large-cell neuroendocrine and not otherwise specified histologies. PDL1 expression was ≤50% in five cases. Concurrent EGFR mutations were detected in three cases, with two cases also showing a PIK3CA E542K mutation and MET amplification, respectively. Due to insufficient tumor material, RNA-sequencing was undertaken in only one IHC-positive case, with the other nine cases analyzed by Fluorescent in-situ Hybridisation. A NTRK fusion, EML4-NTRK3 gene fusion was detected in one patient, a frequency of 0.35%. NTRK fusions in NSCLC are rare. This study highlights real world diagnostic challenges regarding NTRK testing, such as requirements of adequate tumor tissue and appropriate testing methodologies.
Link
Citation
Journal of Thoracic Disease 2023-07-31; 15(7)
Jornal Title
Journal of Thoracic Disease

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