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Title: Automated Interictal Epileptiform Discharge Detection from Scalp EEG Using Scalable Time-series Classification Approaches.
Austin Authors: Nhu, D;Janmohamed, M;Shakhatreh, L;Gonen, O;Perucca, P;Gilligan, A;Kwan, P;O'Brien, T J;Tan, C W;Kuhlmann, L
Affiliation: Department of Data Science and Artificial Intelligence, Faculty of Information Technology, Monash University, Melbourne, VIC, Australia.
Epilepsy Research Centre
Department of Neuroscience, Central Clinical School, Monash University, Melbourne, VIC, Australia.
Bladin-Berkovic Comprehensive Epilepsy Program, Department of Neurology, Austin Health, Melbourne, VIC, Australia.
Issue Date: 5-Jan-2023
Date: 2023
Publication information: International Journal of Neural Systems 2023; 33(1)
Abstract: Deep learning for automated interictal epileptiform discharge (IED) detection has been topical with many published papers in recent years. All existing works viewed EEG signals as time-series and developed specific models for IED classification; however, general time-series classification (TSC) methods were not considered. Moreover, none of these methods were evaluated on any public datasets, making direct comparisons challenging. This paper explored two state-of-the-art convolutional-based TSC algorithms, InceptionTime and Minirocket, on IED detection. We fine-tuned and cross-evaluated them on a public (Temple University Events - TUEV) and two private datasets and provided ready metrics for benchmarking future work. We observed that the optimal parameters correlated with the clinical duration of an IED and achieved the best area under precision-recall curve (AUPRC) of 0.98 and F1 of 0.80 on the private datasets, respectively. The AUPRC and F1 on the TUEV dataset were 0.99 and 0.97, respectively. While algorithms trained on the private sets maintained their performance when tested on the TUEV data, those trained on TUEV could not generalize well to the private data. These results emerge from differences in the class distributions across datasets and indicate a need for public datasets with a better diversity of IED waveforms, background activities and artifacts to facilitate standardization and benchmarking of algorithms.
DOI: 10.1142/S0129065723500016
Journal: International Journal of Neural Systems
Start page: 2350001
PubMed URL: 36599664
ISSN: 1793-6462
Type: Journal Article
Subjects: Interictal epileptiform discharge
clinical decision support
deep learning
epileptic spikes
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